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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2329915_2330055_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2329915 - 2330055

Intron Length:

141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

GATATGTCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

AATCCTTTGATA

Flanking Amino Acid:

SIPFLFSKELIVFQIQRLLE

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.1

Major BPS

84.4

0.85

34.5

Major PPT

61.4

0.26

1.1

46.6

Minor 5ss

29.9

-2.3

3.3

42.5

Minor BPS

63.2

0.41

1.2

66.69

32.9

Associated Gene:

Gene:

TRIM66

Ensembl Gene ID:

ENSAPLG00000004186

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004312

2323318 - 2353991

30674