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Intron Name: Anas_platyrhynchos_platyrhynchos_5_23309340_23310435_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23309340 - 23310435

Intron Length:

1096

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

GCTTGCTGAATT

Flanking Amino Acid:

PTECFPAARQNGERPSHQIH

Intron Amino Acid Position:

1347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

74.4

Major BPS

0.42

1.1

57.3

41.7

Major PPT

86.8

0.83

0.6

85.9

Minor 5ss

32.4

-2

3.1

40.9

45.1

Minor BPS

56.2

0.27

1.9

73.4

43.7

Associated Gene:

Gene:

AQR

Ensembl Gene ID:

ENSAPLG00000008144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008533

23305229 - 23360084

54856

ENSAPLT00000034119

23305909 - 23360084

54176

ENSAPLT00000032745

23305909 - 23360084

54176