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Intron Name: Anas_platyrhynchos_platyrhynchos_5_23310611_23311414_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23310611 - 23311414

Intron Length:

804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

GTTTTTTTGAAG

Flanking Amino Acid:

LVRTKAVGHLRDVRRLVVAM

Intron Amino Acid Position:

1288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

79.7

35.4

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

80.9

0.69

82.9

32.5

Minor 5ss

41.2

-1

2.5

50.1

46.4

Minor BPS

58.5

0.12

1.5

63.56

38.5

Associated Gene:

Gene:

AQR

Ensembl Gene ID:

ENSAPLG00000008144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008533

23305229 - 23360084

54856

ENSAPLT00000034119

23305909 - 23360084

54176

ENSAPLT00000032745

23305909 - 23360084

54176