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Intron Name: Anas_platyrhynchos_platyrhynchos_5_23312366_23316053_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23312366 - 23316053

Intron Length:

3688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGAACTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TCCTTTTGAACT

Flanking Amino Acid:

ESEPNPYFYQNLGEAEYVVA

Intron Amino Acid Position:

1203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

67.8

0.4

1.1

70.3

39.4

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

0.52

1.4

75.64

41.7

Associated Gene:

Gene:

AQR

Ensembl Gene ID:

ENSAPLG00000008144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008533

23305229 - 23360084

54856

ENSAPLT00000034119

23305909 - 23360084

54176