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Intron Name: Anas_platyrhynchos_platyrhynchos_5_23326800_23329159_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23326800 - 23329159

Intron Length:

2360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

ATTCGTTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAA

U12 Branch Point Sequence:

TTAACCTTAATT

Flanking Amino Acid:

EELETEKDFSRYGRVNYVLA

Intron Amino Acid Position:

897

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

0.8

76.8

33.7

Major BPS

70.6

0.51

0.9

61.4

36.2

Major PPT

78.9

0.65

0.8

73.6

36.3

Minor 5ss

27.4

-2.6

2.7

30.4

Minor BPS

81.4

1.06

1.1

89.98

33.8

Associated Gene:

Gene:

AQR

Ensembl Gene ID:

ENSAPLG00000008144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032745

23305909 - 23360084

54176

ENSAPLT00000008533

23305229 - 23360084

54856

ENSAPLT00000034119

23305909 - 23360084

54176