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Intron Name: Anas_platyrhynchos_platyrhynchos_5_23329270_23330783_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23329270 - 23330783

Intron Length:

1514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATAT

5'SS Class:

strong_major

3'SS Sequence:

TGTCAATCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

CTCTTGTCAATC

Flanking Amino Acid:

RTLIVTHSNQALNQLFEKIM

Intron Amino Acid Position:

861

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

82.9

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

70.9

0.47

0.9

67.3

39.1

Minor 5ss

34.2

-1.8

3.2

46.6

48.7

Minor BPS

46.1

-0.3

2.2

57.18

42.5

Associated Gene:

Gene:

AQR

Ensembl Gene ID:

ENSAPLG00000008144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008533

23305229 - 23360084

54856

ENSAPLT00000032745

23305909 - 23360084

54176