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Intron Name: Anas_platyrhynchos_platyrhynchos_5_23329270_23333303_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23329270 - 23333303

Intron Length:

4034

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TGTCAATCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

CTCTTGTCAATC

Flanking Amino Acid:

RAGMQPGLTMALNQLFEKIM

Intron Amino Acid Position:

824

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.8

86.3

28.9

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

70.9

0.47

0.9

67.3

39.1

Minor 5ss

39.6

-1.2

3.2

55.5

42.8

Minor BPS

46.1

-0.3

2.2

57.18

42.5

Associated Gene:

Gene:

AQR

Ensembl Gene ID:

ENSAPLG00000008144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034119

23305909 - 23360084

54176