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Intron Name: Anas_platyrhynchos_platyrhynchos_5_23336612_23337266_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23336612 - 23337266

Intron Length:

655

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTAC

5'SS Class:

strong_major

3'SS Sequence:

CTCCAATTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCAAT

U12 Branch Point Sequence:

CCTTCTCCAATT

Flanking Amino Acid:

RRKPKENNFKAVLETIRNLM

Intron Amino Acid Position:

671

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

79.1

30.7

Major BPS

59.5

0.24

1.3

68.4

35.9

Major PPT

75.7

0.58

0.9

68.2

36.2

Minor 5ss

-1.5

3.3

49.2

47.3

Minor BPS

49.3

0.03

1.9

68.25

43.4

Associated Gene:

Gene:

AQR

Ensembl Gene ID:

ENSAPLG00000008144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034119

23305909 - 23360084

54176

ENSAPLT00000032745

23305909 - 23360084

54176

ENSAPLT00000008533

23305229 - 23360084

54856