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Intron Name: Anas_platyrhynchos_platyrhynchos_5_23343821_23344310_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23343821 - 23344310

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCAT

5'SS Class:

major

3'SS Sequence:

TTCTATTATGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATTAT

U12 Branch Point Sequence:

TTATCTTCTATT

Flanking Amino Acid:

DSLVKLFGPLSSNTLHQVAS

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

71.5

39.9

Major BPS

72.4

0.56

1.1

63.7

42.3

Major PPT

81.6

0.71

0.9

77.2

35.7

Minor 5ss

32.5

-2

3.4

47.3

48.1

Minor BPS

55.4

0.25

1.8

76.74

40.4

Associated Gene:

Gene:

AQR

Ensembl Gene ID:

ENSAPLG00000008144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034119

23305909 - 23360084

54176

ENSAPLT00000032745

23305909 - 23360084

54176

ENSAPLT00000008533

23305229 - 23360084

54856