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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2342433_2342670_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2342433 - 2342670

Intron Length:

238

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGT|GCAAGGTAG

5'SS Class:

major

3'SS Sequence:

CTGGAAAATGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TTCCTCTGAAGC

Flanking Amino Acid:

PGDTLQSSAKYLNTVDHPLE

Intron Amino Acid Position:

628

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.5

0.27

1.4

51.7

45.3

Major BPS

78.6

0.71

78.6

Major PPT

48.3

-0.1

1.2

43.2

40.4

Minor 5ss

27.7

-2.6

4.2

38.1

46.8

Minor BPS

51.5

0.03

1.8

64.1

41.5

Associated Gene:

Gene:

TRIM66

Ensembl Gene ID:

ENSAPLG00000004186

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004312

2323318 - 2353991

30674