Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_2356604_2364769_F

Intron Information:

Intron Rank:

143406

Intron Class:

major

Intron Phase:

Intron Coordinates:

2356604 - 2364769

Intron Length:

8166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCATAATT

5'SS Class:

major

3'SS Sequence:

CTCTCCTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGACAAT

U12 Branch Point Sequence:

CTCTCCTGTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.3

77.4

37.4

Major BPS

1.4

59.1

44.1

Major PPT

0.61

0.9

71.5

Minor 5ss

34.9

-1.7

3.1

50.1

45.8

Minor BPS

56.9

0.21

1.9

68.02

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043213

2356326 - 2365809

9484