Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_23606284_23611028_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23606284 - 23611028

Intron Length:

4745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TTGACTGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TATTTCTTGACT

Flanking Amino Acid:

LANLRPAESTGQTDELDSYM

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.6

40.1

Major BPS

68.1

0.45

58.1

38.5

Major PPT

65.7

0.35

1.1

61.5

44.4

Minor 5ss

31.4

-2.1

3.1

46.4

Minor BPS

82.6

1.11

91.78

30.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007825

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022070

23417321 - 23615595

198275

ENSAPLT00000008122

23417386 - 23615595

198210