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Intron Name: Anas_platyrhynchos_platyrhynchos_5_24165064_24166843_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24165064 - 24166843

Intron Length:

1780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

GCTGTCACCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTCACTTTATTT

Flanking Amino Acid:

TPDFILEVPVAVEGHIIHWI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.2

1.11

0.7

90.9

28.7

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

61.3

0.25

0.9

51.8

Minor 5ss

40.2

-1.1

3.1

58.6

45.9

Minor BPS

60.7

0.41

1.6

76.03

41.4

Associated Gene:

Gene:

C15orf41

Ensembl Gene ID:

ENSAPLG00000007516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040111

24163562 - 24225472

61911

ENSAPLT00000007815

24129249 - 24226480

97232