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Intron Name: Anas_platyrhynchos_platyrhynchos_5_24166950_24225336_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24166950 - 24225336

Intron Length:

58387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACATTAC

5'SS Class:

major

3'SS Sequence:

TTTTTCTTGATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTCAT

U12 Branch Point Sequence:

TTTTTCTTGATA

Flanking Amino Acid:

LQDQFWSYWNRFGPGLVIYW

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

71.9

34.4

Major BPS

74.4

0.61

1.2

77.7

37.1

Major PPT

82.1

0.72

0.9

80.6

31.5

Minor 5ss

38.8

-1.3

3.1

52.1

45.1

Minor BPS

80.4

0.95

0.9

85.58

26.2

Associated Gene:

Gene:

C15orf41

Ensembl Gene ID:

ENSAPLG00000007516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040111

24163562 - 24225472

61911

ENSAPLT00000007815

24129249 - 24226480

97232