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Intron Name: Anas_platyrhynchos_platyrhynchos_5_24272161_24272472_R

Intron Information:

Intron Rank:

140629

Intron Class:

major

Intron Phase:

Intron Coordinates:

24272161 - 24272472

Intron Length:

312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAATAA

5'SS Class:

major

3'SS Sequence:

GTTTTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTCAC

U12 Branch Point Sequence:

GTCACCGCAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

67.4

Major BPS

54.8

0.12

1.2

58.7

38.1

Major PPT

89.1

0.88

0.7

81.2

36.5

Minor 5ss

35.5

-1.6

3.3

48.4

Minor BPS

42.8

-0.5

2.2

53.64

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021657

24271498 - 24272797

1300