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Intron Name: Anas_platyrhynchos_platyrhynchos_5_24272493_24272622_R

Intron Information:

Intron Rank:

140630

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24272493 - 24272622

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAAGGA

5'SS Class:

major

3'SS Sequence:

TGCTCACCGTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CTGTGCTCACCG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

59.4

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

47.2

-0.1

1.7

55.2

40.4

Minor 5ss

27.8

-2.6

3.6

38.3

46.7

Minor BPS

43.9

-0.6

2.2

50.86

49.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021657

24271498 - 24272797

1300