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Intron Name: Anas_platyrhynchos_platyrhynchos_5_24279353_24280729_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24279353 - 24280729

Intron Length:

1377

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TGACTACAATCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTACAA

U12 Branch Point Sequence:

TTGACTACAATC

Flanking Amino Acid:

QPMIDQSNRAGFLLDPSVSQ

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.14

0.7

85.2

29.9

Major BPS

52.2

0.06

34.9

Major PPT

59.4

0.21

1.1

57.1

42.5

Minor 5ss

31.1

-2.2

3.8

44.6

43.4

Minor BPS

47.4

-0.2

1.8

60.2

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007631

24279204 - 24441259

162056