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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_2441858_2444297_F

Intron Information:

Intron Rank:
134795
Intron Class:
major
Intron Phase:
Intron Coordinates:
2441858 - 2444297
Intron Length:
2440

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CTG|GTGAGCAGT
5'SS Class:
major
3'SS Sequence:
ATTTAACTTTCAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TATTTAA
U12 Branch Point Sequence:
CTATATTTAACT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
78.4
0.67
1
70.5
41.3
Major BPS
79.5
0.73
0.9
70
36.9
Major PPT
79.5
0.66
0.9
75.2
39
Minor 5ss
35.8
-1.6
3
45.5
44.6
Minor BPS
70
0.71
1.5
81.67
39.8

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000022494
Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000039600
2441696 - 2446033
4338