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Intron Name: Anas_platyrhynchos_platyrhynchos_5_24428856_24438975_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24428856 - 24438975

Intron Length:

10120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

ACTCTGACACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

GGCACTCTGACA

Flanking Amino Acid:

SGSSTNLADHNPSSWRDHDD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.5

28.7

Major BPS

0.1

59.7

32.6

Major PPT

61.6

0.26

52.6

40.9

Minor 5ss

45.3

-0.5

2.8

64.3

39.9

Minor BPS

46.9

-0.2

1.7

53.44

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007631

24279204 - 24441259

162056