Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_24453929_24454138_F

Intron Information:

Intron Rank:

137987

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24453929 - 24454138

Intron Length:

210

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTAA

5'SS Class:

major

3'SS Sequence:

AAAATCCTGCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

CTTTGTTTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

74.8

30.7

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

53.1

0.07

1.1

44.6

42.4

Minor 5ss

45.7

-0.5

2.5

58.1

46.4

Minor BPS

53.1

0.18

74.65

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023415

24453259 - 24455968

2710