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Intron Name: Anas_platyrhynchos_platyrhynchos_5_24701367_24776268_R

Intron Information:

Intron Rank:

149757

Intron Class:

major

Intron Phase:

Intron Coordinates:

24701367 - 24776268

Intron Length:

74902

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTGTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAAGAT

U12 Branch Point Sequence:

TTTGTTGTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.9

33.7

Major BPS

58.6

0.22

1.1

55.1

40.4

Major PPT

77.3

0.61

73.3

40.9

Minor 5ss

27.4

-2.6

2.7

31.6

42.2

Minor BPS

55.9

0.18

2.1

73.92

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028122

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043299

24700285 - 24777741

77457