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Intron Name: Anas_platyrhynchos_platyrhynchos_5_24748277_24748509_R

Intron Information:

Intron Rank:

137760

Intron Class:

major

Intron Phase:

Intron Coordinates:

24748277 - 24748509

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATATAC

5'SS Class:

strong_major

3'SS Sequence:

TTACTCCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTTTTCAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

30.6

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

79.3

0.66

0.8

70.5

Minor 5ss

38.3

-1.3

50.5

46.1

Minor BPS

64.5

0.32

1.5

70.72

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021633

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047325

24748115 - 24749392

1278