Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_24776544_24777475_R

Intron Information:

Intron Rank:

149758

Intron Class:

major

Intron Phase:

Intron Coordinates:

24776544 - 24777475

Intron Length:

932

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATT

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTCATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

GCATCTTTCATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

27.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

0.65

0.9

74.2

Minor 5ss

38.8

-1.3

3.2

57.6

46.6

Minor BPS

49.4

-0.1

1.8

52.22

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028122

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043299

24700285 - 24777741

77457