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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2485580_2486555_F

Intron Information:

Intron Rank:

139985

Intron Class:

major

Intron Phase:

Intron Coordinates:

2485580 - 2486555

Intron Length:

976

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTACGTTAA

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTGAAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TTCTCTCTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.2

64.7

37.7

Major BPS

72.7

0.56

30.1

Major PPT

81.8

0.72

0.9

24.6

Minor 5ss

41.4

-1

3.1

58.2

46.4

Minor BPS

0.27

2.1

80.09

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036121

2484979 - 2519901

34923

ENSAPLT00000017745

2484979 - 2508914

23936