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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2487349_2487467_F

Intron Information:

Intron Rank:

139990

Intron Class:

major

Intron Phase:

Intron Coordinates:

2487349 - 2487467

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCTGTTTT

5'SS Class:

major

3'SS Sequence:

CTGTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

CATTTGTCAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.3

80.5

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

82.1

0.72

0.8

81.3

30.8

Minor 5ss

47.6

-0.2

2.6

67.4

43.7

Minor BPS

45.9

-0.2

2.3

66.16

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018971

2450360 - 2487626

37267