Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_24991975_24998613_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24991975 - 24998613

Intron Length:

6639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

GTGTTCTGAAAA

Flanking Amino Acid:

PPLLTKVEQKIKDVLSKVQK

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

78.6

35.4

Major BPS

74.5

0.61

79.6

29.1

Major PPT

85.4

0.8

0.9

79.9

37.7

Minor 5ss

41.2

-1

3.7

63.6

48.1

Minor BPS

57.8

0.24

1.6

66.18

39.7

Associated Gene:

Gene:

FAM98B

Ensembl Gene ID:

ENSAPLG00000006881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007146

24989226 - 25003599

14374