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Intron Name: Anas_platyrhynchos_platyrhynchos_5_25012476_25013077_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25012476 - 25013077

Intron Length:

602

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

TTTTGTTTACAG

Flanking Amino Acid:

GVIKQGYRCKDCGMNCHKQC

Intron Amino Acid Position:

642

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

81.2

26.3

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

0.81

0.8

79.9

37.7

Minor 5ss

38.2

-1.3

3.1

49.9

46.6

Minor BPS

49.1

-0.2

2.2

63.96

44.2

Associated Gene:

Gene:

RASGRP1

Ensembl Gene ID:

ENSAPLG00000006429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029576

25009781 - 25049845

40065

ENSAPLT00000006703

25010156 - 25049313

39158