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Intron Name: Anas_platyrhynchos_platyrhynchos_5_25016329_25018547_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25016329 - 25018547

Intron Length:

2219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTCTA

5'SS Class:

major

3'SS Sequence:

TGTTTGTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

ATTAAACTAATA

Flanking Amino Acid:

ANMDLVHLLTLSLDLYYTED

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

72.1

39.4

Major BPS

77.9

0.69

0.8

75.9

Major PPT

0.83

0.8

84.6

Minor 5ss

-1.1

55.9

42.3

Minor BPS

45.6

-0.3

62.11

37.2

Associated Gene:

Gene:

RASGRP1

Ensembl Gene ID:

ENSAPLG00000006429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029576

25009781 - 25049845

40065

ENSAPLT00000006703

25010156 - 25049313

39158