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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2506190_2508003_F

Intron Information:

Intron Rank:

139991

Intron Class:

major

Intron Phase:

Intron Coordinates:

2506190 - 2508003

Intron Length:

1814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

ATAATATTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TGTGATATAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

80.7

31.6

Major BPS

0.72

78.4

31.2

Major PPT

0.56

70.9

43.7

Minor 5ss

36.5

-1.5

3.6

53.2

Minor BPS

47.9

-0.1

1.8

61.78

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030203

2505948 - 2508480

2533