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Intron Name: Anas_platyrhynchos_platyrhynchos_5_25086688_25087343_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25086688 - 25087343

Intron Length:

656

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGGCATCG

5'SS Class:

weak_major

3'SS Sequence:

GCGCGGCGTGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCTGAG

U12 Branch Point Sequence:

CATGGCGGAGCG

Flanking Amino Acid:

MWDKRLAVLQELRA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.9

0.05

1.2

46.7

38.6

Major BPS

44.9

-0.3

1.6

42.9

Major PPT

54.6

0.11

1.1

45.8

41.4

Minor 5ss

38.7

-1.3

3.3

47.5

42.6

Minor BPS

33.1

-1.4

2.3

36.78

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026375

25086676 - 25098271

11596