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Intron Name: Anas_platyrhynchos_platyrhynchos_5_25087457_25089324_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25087457 - 25089324

Intron Length:

1868

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCGGTGGTG

5'SS Class:

weak_major

3'SS Sequence:

TCTTATAGGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

AGTCTTTGAATA

Flanking Amino Acid:

HGATAAEVGGWIFGVSFHAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.5

0.11

1.2

54.6

Major BPS

82.6

0.81

0.8

71.7

Major PPT

61.3

0.25

1.1

58.9

41.5

Minor 5ss

15.9

-3.9

4.1

24.5

39.9

Minor BPS

52.5

0.08

1.3

60.49

32.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026375

25086676 - 25098271

11596