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Intron Name: Anas_platyrhynchos_platyrhynchos_5_25112047_25115718_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25112047 - 25115718

Intron Length:

3672

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCGAAATAT

5'SS Class:

major

3'SS Sequence:

GGATTACTTAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTATTTTTAAAA

Flanking Amino Acid:

SAFPSDLFYQKLKHLYFSSC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.1

67.1

34.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

49.4

-0

1.7

54.5

44.8

Minor 5ss

23.2

-3.1

3.9

37.5

47.2

Minor BPS

65.2

0.47

1.3

69.89

35.8

Associated Gene:

Gene:

SCG5

Ensembl Gene ID:

ENSAPLG00000017881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046093

25111951 - 25127157

15207

ENSAPLT00000037536

25111951 - 25127157

15207