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Intron Name: Anas_platyrhynchos_platyrhynchos_5_25123254_25127061_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25123254 - 25127061

Intron Length:

3808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAACTATC

5'SS Class:

major

3'SS Sequence:

CATTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTTCTAATAAAT

Flanking Amino Acid:

MNGGPKRRKRSVNPYLQGQR

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.2

76.2

39.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

89.9

0.9

0.7

88.2

28.6

Minor 5ss

45.4

-0.5

2.6

55.1

42.4

Minor BPS

49.6

0.05

1.9

77.14

38.3

Associated Gene:

Gene:

SCG5

Ensembl Gene ID:

ENSAPLG00000017881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046093

25111951 - 25127157

15207

ENSAPLT00000027018

25114810 - 25127157

12348

ENSAPLT00000020150

25111422 - 25127157

15736