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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2529793_2539191_R

Intron Information:

Intron Rank:

135812

Intron Class:

major

Intron Phase:

Intron Coordinates:

2529793 - 2539191

Intron Length:

9399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCAT

5'SS Class:

major

3'SS Sequence:

CAATGCATTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAT

U12 Branch Point Sequence:

GTTGCCCTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

71.5

39.9

Major BPS

69.6

0.49

1.1

69.5

Major PPT

67.1

0.39

58.3

41.5

Minor 5ss

32.5

-2

3.4

47.3

48.1

Minor BPS

61.2

0.35

1.8

72.87

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039645

2520510 - 2539248

18739