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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2546740_2548209_F

Intron Information:

Intron Rank:

131454

Intron Class:

major

Intron Phase:

Intron Coordinates:

2546740 - 2548209

Intron Length:

1470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TGTACTTGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

TGTTCTGTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.7

34.9

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

70.3

0.46

65.1

41.1

Minor 5ss

39.7

-1.2

2.8

46.1

43.6

Minor BPS

50.2

0.08

2.2

75.88

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041924

2546428 - 2548454

2027

ENSAPLT00000029072

2546428 - 2548454

2027