Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_25493283_25495074_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25493283 - 25495074

Intron Length:

1792

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGTACC

5'SS Class:

major

3'SS Sequence:

TGTTGACTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

GCTATCTTACCT

Flanking Amino Acid:

EDLKKVKLPKNYMMSNGYKP

Intron Amino Acid Position:

921

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

74.3

34.2

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

77.6

0.62

0.9

69.7

40.7

Minor 5ss

44.8

-0.6

2.4

55.6

35.3

Minor BPS

58.6

0.35

1.7

72.79

44.1

Associated Gene:

Gene:

RYR3

Ensembl Gene ID:

ENSAPLG00000005134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005441

25438868 - 25615901

177034

ENSAPLT00000030790

25438868 - 25615901

177034