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Intron Name: Anas_platyrhynchos_platyrhynchos_5_25507729_25508230_F


Intron Information:

Intron Rank:
33

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
25507729 - 25508230

Intron Length:
502

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGACCATT

5'SS Class:
major

3'SS Sequence:
TTTTCTATGCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTAAAAT

U12 Branch Point Sequence:
TTGAACTTAACC

Flanking Amino Acid:
TRLPESVKLQMCHLLNYFCD

Intron Amino Acid Position:
1767

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.3
0.6
1.1
77.8
38.7

Major BPS
70.6
0.51
1.1
75.9
34.4

Major PPT
75.3
0.57
1
70.8
39.7

Minor 5ss
45.4
-0.5
2.9
66
45.2

Minor BPS
69.4
0.59
1.6
76.46
39.3

Associated Gene:

Gene:
RYR3

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

25438868 - 25615901
177034

25438868 - 25615901
177034