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Intron Name: Anas_platyrhynchos_platyrhynchos_5_25532673_25533916_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25532673 - 25533916

Intron Length:

1244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ACTTTCTTAATT

Flanking Amino Acid:

LLGRCAPEMHLIQSGKGEAI

Intron Amino Acid Position:

2263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

79.7

Major BPS

0.92

0.9

86.2

29.1

Major PPT

88.1

0.86

0.8

85.4

27.8

Minor 5ss

42.9

-0.8

2.7

55.2

42.1

Minor BPS

79.4

1.1

85.57

Associated Gene:

Gene:

RYR3

Ensembl Gene ID:

ENSAPLG00000005134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030790

25438868 - 25615901

177034

ENSAPLT00000005441

25438868 - 25615901

177034