Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_25569401_25569508_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25569401 - 25569508

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGATAA

5'SS Class:

strong_major

3'SS Sequence:

TGGTTGTTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TTGTTGTTGGTT

Flanking Amino Acid:

EVFILWCKSHNFKREEQNFV

Intron Amino Acid Position:

3266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

28.7

Major BPS

0.82

0.8

24.9

Major PPT

75.8

0.58

0.9

73.5

41.9

Minor 5ss

39.7

-1.2

3.1

51.8

45.1

Minor BPS

38.5

-0.8

3.7

69.4

42.7

Associated Gene:

Gene:

RYR3

Ensembl Gene ID:

ENSAPLG00000005134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030790

25438868 - 25615901

177034

ENSAPLT00000005441

25438868 - 25615901

177034