Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_25590942_25591457_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25590942 - 25591457

Intron Length:

516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTTTG

5'SS Class:

strong_major

3'SS Sequence:

ATATATTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATTATCA

Flanking Amino Acid:

EEGTLIVRERGEKVLQHDEF

Intron Amino Acid Position:

3658

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

73.2

38.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

67.6

0.4

1.1

64.8

Minor 5ss

50.3

0.01

2.4

63.2

42.8

Minor BPS

62.8

0.4

1.9

76.51

40.6

Associated Gene:

Gene:

RYR3

Ensembl Gene ID:

ENSAPLG00000005134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030790

25438868 - 25615901

177034

ENSAPLT00000005441

25438868 - 25615901

177034