Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_25593032_25593452_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25593032 - 25593452

Intron Length:

421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTGCA

5'SS Class:

major

3'SS Sequence:

TTTTATTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATTT

Flanking Amino Acid:

FANMQMKLSQDSAQIELLKE

Intron Amino Acid Position:

3793

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

69.6

34.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.7

0.96

0.7

87.8

29.3

Minor 5ss

39.1

-1.2

50.7

45.7

Minor BPS

63.7

0.51

1.5

78.58

38.8

Associated Gene:

Gene:

RYR3

Ensembl Gene ID:

ENSAPLG00000005134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030790

25438868 - 25615901

177034

ENSAPLT00000005441

25438868 - 25615901

177034