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Intron Name: Anas_platyrhynchos_platyrhynchos_5_25694206_25715205_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25694206 - 25715205

Intron Length:

21000

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGAGG

5'SS Class:

major

3'SS Sequence:

TAAAATGCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TGTCTGTTAAAA

Flanking Amino Acid:

PPAAHHHYRRVEDDDDDDTE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.1

64.3

47.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

63.2

0.3

1.1

54.3

Minor 5ss

31.2

-2.1

3.1

31.4

42.5

Minor BPS

49.8

-0

2.1

66.65

39.3

Associated Gene:

Gene:

AVEN

Ensembl Gene ID:

ENSAPLG00000005096

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005272

25617142 - 25715466

98325