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Intron Name: Anas_platyrhynchos_platyrhynchos_5_25739377_25745671_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25739377 - 25745671

Intron Length:

6295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTTATG

5'SS Class:

major

3'SS Sequence:

TCTTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGAAA

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

KAGKSSSGKRRLCYFSCKVA

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

74.6

41.7

Major BPS

57.6

0.19

1.3

67.9

36.3

Major PPT

86.9

0.83

0.7

80.6

31.5

Minor 5ss

-1.4

3.1

50.7

45.8

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

EMC7

Ensembl Gene ID:

ENSAPLG00000029303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027974

25739236 - 25753565

14330