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Intron Name: Anas_platyrhynchos_platyrhynchos_5_25750715_25753320_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25750715 - 25753320

Intron Length:

2606

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGCGCC

5'SS Class:

major

3'SS Sequence:

TATTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

AAATGTTGAAAT

Flanking Amino Acid:

VDGEEHVGFLKTDGSFVVHD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

35.9

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

93.6

0.98

0.6

92.5

25.6

Minor 5ss

33.9

-1.8

3.3

42.5

38.7

Minor BPS

46.8

-0.1

1.9

62.92

40.6

Associated Gene:

Gene:

EMC7

Ensembl Gene ID:

ENSAPLG00000029303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027974

25739236 - 25753565

14330