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Intron Name: Anas_platyrhynchos_platyrhynchos_5_25777829_25783142_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

25777829 - 25783142

Intron Length:

5314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TCCTTGAAAATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCACAA

U12 Branch Point Sequence:

TTTTCCTTGAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

34.8

Major BPS

68.5

0.46

75.3

29.8

Major PPT

59.4

0.21

55.5

38.1

Minor 5ss

39.4

-1.2

2.9

52.2

44.4

Minor BPS

81.1

0.97

1.2

87.98

28.7

Associated Gene:

Gene:

KATNBL1

Ensembl Gene ID:

ENSAPLG00000004713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030505

25770737 - 25783315

12579

ENSAPLT00000030213

25770737 - 25783936

13200

ENSAPLT00000042898

25771612 - 25783936

12325