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Intron Name: Anas_platyrhynchos_platyrhynchos_5_25786552_25809849_F

Intron Information:

Intron Rank:

142811

Intron Class:

major

Intron Phase:

Intron Coordinates:

25786552 - 25809849

Intron Length:

23298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

GTTTGTGTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTAAAA

U12 Branch Point Sequence:

TTTGTGTTATAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

79.3

34.5

Major BPS

60.6

0.26

1.1

67.5

35.1

Major PPT

0.56

68.8

42.1

Minor 5ss

40.8

-1

3.4

63.8

41.6

Minor BPS

43.3

-0.6

2.4

55.55

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044233

25786336 - 25829872

43537