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Intron Name: Anas_platyrhynchos_platyrhynchos_5_25786552_25829140_F

Intron Information:

Intron Rank:

142808

Intron Class:

major

Intron Phase:

Intron Coordinates:

25786552 - 25829140

Intron Length:

42589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TGCCTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATAAA

U12 Branch Point Sequence:

CTATAAAGAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

79.3

34.5

Major BPS

66.3

0.4

1.1

34.4

Major PPT

81.6

0.71

0.8

80.4

31.6

Minor 5ss

40.8

-1

3.4

63.8

41.6

Minor BPS

42.9

-0.5

56.98

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021457

25786336 - 25829420

43085