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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2619767_2621556_F

Intron Information:

Intron Rank:

137853

Intron Class:

major

Intron Phase:

Intron Coordinates:

2619767 - 2621556

Intron Length:

1790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTCAAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTGTTTCAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

85.3

32.2

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

69.6

0.44

1.1

72.4

36.9

Minor 5ss

36.1

-1.6

2.7

45.8

42.3

Minor BPS

52.9

0.09

1.7

68.07

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043219

2582740 - 2621797

39058