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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26209415_26209645_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26209415 - 26209645

Intron Length:

231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

CGTCTCTCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTTAC

U12 Branch Point Sequence:

CGTGCCTTACGG

Flanking Amino Acid:

RGGSEARRTAESRADDNSVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

73.9

Major BPS

51.2

0.03

1.2

45.3

39.5

Major PPT

74.9

0.56

0.8

31.5

Minor 5ss

37.1

-1.5

3.3

50.2

46.4

Minor BPS

46.5

-0.4

2.1

51.24

48.9

Associated Gene:

Gene:

THBS1

Ensembl Gene ID:

ENSAPLG00000003908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033628

26208927 - 26223145

14219

ENSAPLT00000004064

26208927 - 26222145

13219