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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26217249_26217617_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26217249 - 26217617

Intron Length:

369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGCCAA

5'SS Class:

major

3'SS Sequence:

CTCTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AAAAACTTGACT

Flanking Amino Acid:

DDDDGIPDDRDNCPFIYNPQ

Intron Amino Acid Position:

709

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

42.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

85.4

0.8

0.7

80.1

25.2

Minor 5ss

36.7

-1.5

39.2

46.1

Minor BPS

56.7

0.29

1.6

69.46

40.5

Associated Gene:

Gene:

THBS1

Ensembl Gene ID:

ENSAPLG00000003908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004064

26208927 - 26222145

13219

ENSAPLT00000033628

26208927 - 26223145

14219